A shiny Module. This module generates messages for the user regarding the files uploaded and if column(s) for a heatmap is available. This module contains 3 functions located in the golem_utils_server file (sanity, not_columns, and m_file_conversion). Essentially. these functions are used for checking or converting files for downstream analyses.

mod_tipCheck_ui(id)

mod_tipCheck_server(
  input,
  output,
  session,
  meta_file_out,
  m_file_out,
  gene_file_out,
  g_file_out,
  t_file_out,
  tree_file_out
)

Arguments

id, input, output, session

internal

meta_file_out

used to confirm that file is uploaded; on/off

m_file_out

meta data that is read in used file for tip checking

gene_file_out

used to confirm that file is uploaded; on/off

g_file_out

gene data that is read in used for tip checking

t_file_out

tree data that is read in for tip checking

tree_file_out

used to confirm that file is uploaded; on/off

Details

tipCheck Function